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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs131693 chr22:23649242 T/G POM121L10P chr22:25053448-25054732:- 0.69 13.53 2.39E-34 Box Plot
BLCA rs13174760 chr5:176634443 C/A LOC388955 chr2:63849182-63850159:- -0.69 -13.08 1.44E-32 Box Plot
BLCA rs13175695 chr5:176699811 A/G LOC388955 chr2:63849182-63850159:- 0.68 13.01 2.58E-32 Box Plot
BLCA rs13175726 chr5:96387033 A/G ATP5EP2 chr13:28519343-28519727:+ -0.33 -6.07 3.15E-9 Box Plot
BLCA rs13177748 chr5:176643954 T/G LOC388955 chr2:63849182-63850159:- -0.71 -13.17 6.14E-33 Box Plot
BLCA rs13185316 chr5:176640340 T/C LOC388955 chr2:63849182-63850159:- -0.72 -13.18 5.57E-33 Box Plot
BLCA rs13191786 chr6:28277671 T/G ZFP57 chr6:29640169-29648887:- 0.71 6.4 4.57E-10 Box Plot
BLCA rs13192965 chr6:27671825 G/A ZFP57 chr6:29640169-29648887:- 0.64 6.05 3.51E-9 Box Plot
BLCA rs13193480 chr6:27702561 A/G ZFP57 chr6:29640169-29648887:- 0.65 6.3 8.27E-10 Box Plot
BLCA rs13193542 chr6:27702425 G/T ZFP57 chr6:29640169-29648887:- 0.65 6.3 8.27E-10 Box Plot
BLCA rs13194781 chr6:27815639 A/G ZFP57 chr6:29640169-29648887:- 0.65 6.23 1.25E-9 Box Plot
BLCA rs13195291 chr6:28169241 G/A ZFP57 chr6:29640169-29648887:- 0.75 6.53 2.06E-10 Box Plot
BLCA rs13197175 chr6:28129231 C/T ZFP57 chr6:29640169-29648887:- 0.74 6.2 1.44E-9 Box Plot
BLCA rs13197176 chr6:28129232 C/T ZFP57 chr6:29640169-29648887:- 0.74 6.2 1.44E-9 Box Plot
BLCA rs13197574 chr6:28060239 T/C ZFP57 chr6:29640169-29648887:- 0.76 6.83 3.43E-11 Box Plot